Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-300066), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
346 Cha-F-100230 XIV 0.57
667 TH-F-300071 XIV 0.50
191 TH-M-200018 XIV 0.46
1028 VGlut-F-000067 XIV 0.41
204 Trh-M-100025 XIV 0.39

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (Gad1-F-300066) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-300066 11236 GadMARCM-F000218_seg001 Gad1-Gal4 F 10831.16 1.00
Cha-F-100328 4379 ChaMARCM-F001434_seg001 Cha-Gal4 F 8202.14 0.76
Cha-F-100194 4978 ChaMARCM-F001073_seg001 Cha-Gal4 F 8205.05 0.75
Cha-F-200270 5213 ChaMARCM-F001247_seg001 Cha-Gal4 F 8180.34 0.75
Cha-F-200134 5308 ChaMARCM-F000690_seg001 Cha-Gal4 F 7516.39 0.70
Cha-F-300233 5503 ChaMARCM-F000822_seg001 Cha-Gal4 F 8022.40 0.72
Cha-F-500106 7241 ChaMARCM-F000414_seg001 Cha-Gal4 F 7855.39 0.74
Cha-F-500043 8066 ChaMARCM-F000136_seg001 Cha-Gal4 F 7793.63 0.72
Cha-F-500028 10170 ChaMARCM-F000100_seg001 Cha-Gal4 F 8190.95 0.75
Gad1-F-300029 10550 GadMARCM-F000077_seg001 Gad1-Gal4 F 7764.87 0.70
Gad1-F-000004 10570 GadMARCM-F000092_seg001 Gad1-Gal4 F 7798.85 0.72
Gad1-F-300040 10572 GadMARCM-F000094_seg001 Gad1-Gal4 F 7809.65 0.73
Gad1-F-000028 11304 GadMARCM-F000277_seg001 Gad1-Gal4 F 7735.78 0.70