Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-300023), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
161 fru-M-100017 XV 0.56
745 Cha-F-300003 XV 0.49
1048 VGlut-F-000167 XV 0.49
736 fru-F-400017 XV 0.46
295 fru-F-100054 XV 0.44

Cluster composition

This cluster has 27 neurons. The exemplar of this cluster (Gad1-F-300023) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-300023 10541 GadMARCM-F000071_seg001 Gad1-Gal4 F 5637.67 1.00
fru-M-600076 413 FruMARCM-M001796_seg001 fru-Gal4 M 2359.99 0.47
fru-M-000107 588 FruMARCM-M001783_seg002 fru-Gal4 M 3115.05 0.55
fru-M-500180 688 FruMARCM-M001893_seg002 fru-Gal4 M 3214.77 0.54
fru-M-400074 1425 FruMARCM-M000938_seg001 fru-Gal4 M 2975.43 0.52
5-HT1B-M-400019 2536 5HT1bMARCM-M000075_seg001 5-HT1B-Gal4 M 2869.19 0.55
fru-F-200161 3774 FruMARCM-F002403_seg001 fru-Gal4 F 1947.79 0.46
Cha-F-100272 4231 ChaMARCM-F001319_seg001 Cha-Gal4 F 2587.24 0.48
Cha-F-100197 5000 ChaMARCM-F001093_seg002 Cha-Gal4 F 3546.02 0.58
Cha-F-300190 5277 ChaMARCM-F000670_seg002 Cha-Gal4 F 2694.74 0.47
Cha-F-000148 5541 ChaMARCM-F000845_seg001 Cha-Gal4 F 2751.52 0.50
Gad1-F-400042 6156 GadMARCM-F000333_seg001 Gad1-Gal4 F 2929.93 0.55
fru-F-400134 6190 FruMARCM-F001120_seg003 fru-Gal4 F 2250.60 0.37
fru-F-400120 7340 FruMARCM-F000976_seg002 fru-Gal4 F 3024.40 0.51
Gad1-F-000043 9516 GadMARCM-F000403_seg002 Gad1-Gal4 F 2820.86 0.52
Gad1-F-500087 9704 GadMARCM-F000547_seg002 Gad1-Gal4 F 2560.21 0.47
fru-F-200049 9876 FruMARCM-F000464_seg001 fru-Gal4 F 2983.96 0.52
fru-F-100025 10022 FruMARCM-F000607_seg001 fru-Gal4 F 2709.08 0.45
Gad1-F-300028 10549 GadMARCM-F000076_seg001 Gad1-Gal4 F 3196.37 0.53
Gad1-F-700010 10633 GadMARCM-F000134_seg001 Gad1-Gal4 F 3222.91 0.58
fru-F-400019 11474 FruMARCM-F000086_seg001 fru-Gal4 F 3183.87 0.56
fru-F-400028 11494 FruMARCM-F000159_seg001 fru-Gal4 F 2830.49 0.53
fru-F-200022 11533 FruMARCM-F000191_seg001 fru-Gal4 F 3234.20 0.59
5-HT1B-F-000000 11618 5HT1bMARCM-F000014_seg001 5-HT1B-Gal4 F 2563.83 0.46
5-HT1B-F-400003 11628 5HT1bMARCM-F000021_seg001 5-HT1B-Gal4 F 3131.50 0.55
VGlut-F-100130 14907 DvGlutMARCM-F1249_seg2 VGlut-Gal4 F 3591.86 0.61
VGlut-F-300256 15116 DvGlutMARCM-F1449_seg2 VGlut-Gal4 F 481.76 0.35